Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm11543-201ENSMUST00000120758 370 ntBASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm27494-201ENSMUST00000184735 189 ntBASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm6973-201ENSMUST00000117080 721 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mir1895-201ENSMUST00000122615 79 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm18737-201ENSMUST00000173594 937 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm24513-201ENSMUST00000174964 138 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm27920-201ENSMUST00000183953 96 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm2756-201ENSMUST00000195851 400 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fndc4Q3TR08 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Fndc4Q3TR08 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms