Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.42■□□□□ 0.06
Tpm1P58771 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.42■□□□□ 0.06
Tpm1P58771 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tpm1P58771 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Gm15483-201ENSMUST00000120338 456 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Gm12882-201ENSMUST00000121696 517 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.42■□□□□ 0.06
Tpm1P58771 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gm27920-201ENSMUST00000183953 96 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Gm7977-201ENSMUST00000193787 748 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.42■□□□□ 0.06
Tpm1P58771 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Tpm1P58771 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Tpm1P58771 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.42■□□□□ 0.06
Tpm1P58771 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm1P58771 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.41■□□□□ 0.06
Tpm1P58771 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tpm1P58771 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.41■□□□□ 0.06
Tpm1P58771 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.41■□□□□ 0.06
Tpm1P58771 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.41■□□□□ 0.06
Tpm1P58771 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.41■□□□□ 0.06
Tpm1P58771 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.41■□□□□ 0.06
Tpm1P58771 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.41■□□□□ 0.06
Tpm1P58771 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.41■□□□□ 0.06
Tpm1P58771 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.41■□□□□ 0.06
Tpm1P58771 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.41■□□□□ 0.06
Tpm1P58771 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.41■□□□□ 0.06
Tpm1P58771 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm1P58771 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.4■□□□□ 0.06
Tpm1P58771 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
Tpm1P58771 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.4■□□□□ 0.06
Tpm1P58771 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.4■□□□□ 0.06
Tpm1P58771 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm1P58771 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.39■□□□□ 0.05
Tpm1P58771 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.39■□□□□ 0.05
Tpm1P58771 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Tpm1P58771 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm1P58771 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.39■□□□□ 0.05
Tpm1P58771 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tpm1P58771 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tpm1P58771 Gm9385-201ENSMUST00000117563 472 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms