Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PSMD4P55036 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.69■□□□□ 0.1
PSMD4P55036 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.69■□□□□ 0.1
PSMD4P55036 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 AC092910.1-201ENST00000482027 1129 ntBASIC15.69■□□□□ 0.1
PSMD4P55036 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.69■□□□□ 0.1
PSMD4P55036 IGHV3-65-201ENST00000523210 341 ntBASIC15.69■□□□□ 0.1
PSMD4P55036 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.69■□□□□ 0.1
PSMD4P55036 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 SLC25A6P4-201ENST00000586535 553 ntBASIC15.69■□□□□ 0.1
PSMD4P55036 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
PSMD4P55036 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.69■□□□□ 0.1
PSMD4P55036 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.69■□□□□ 0.1
PSMD4P55036 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
PSMD4P55036 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PSMD4P55036 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PSMD4P55036 KRT8P49-201ENST00000604166 1432 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 AC106886.4-201ENST00000623557 2502 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 AP002414.3-201ENST00000589352 1468 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 MRPL3P1-201ENST00000400109 1033 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 MRPL20P1-201ENST00000400819 433 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.68■□□□□ 0.1
PSMD4P55036 AC087163.2-201ENST00000457299 853 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.68■□□□□ 0.1
PSMD4P55036 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PSMD4P55036 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PSMD4P55036 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PSMD4P55036 AC129492.6-201ENST00000611383 1305 ntBASIC15.68■□□□□ 0.1
PSMD4P55036 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PSMD4P55036 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PSMD4P55036 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PSMD4P55036 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.67■□□□□ 0.1
PSMD4P55036 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PSMD4P55036 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.67■□□□□ 0.1
PSMD4P55036 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PSMD4P55036 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMD4P55036 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms