Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.9□□□□□ -0.66
Pde6dO55057 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.9□□□□□ -0.66
Pde6dO55057 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pde6dO55057 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.89□□□□□ -0.67
Pde6dO55057 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.89□□□□□ -0.67
Pde6dO55057 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Pde6dO55057 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.89□□□□□ -0.67
Pde6dO55057 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.89□□□□□ -0.67
Pde6dO55057 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Pde6dO55057 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pde6dO55057 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.88□□□□□ -0.67
Pde6dO55057 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.88□□□□□ -0.67
Pde6dO55057 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.88□□□□□ -0.67
Pde6dO55057 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pde6dO55057 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pde6dO55057 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.88□□□□□ -0.67
Pde6dO55057 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.88□□□□□ -0.67
Pde6dO55057 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Pde6dO55057 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pde6dO55057 Gm4535-201ENSMUST00000182274 558 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms