Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.54□□□□□ -0.4
Rnf13O54965 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.54□□□□□ -0.4
Rnf13O54965 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf13O54965 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf13O54965 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf13O54965 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf13O54965 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf13O54965 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Mir8117-201ENSMUST00000184773 107 ntBASIC12.53□□□□□ -0.4
Rnf13O54965 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf13O54965 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf13O54965 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf13O54965 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rnf13O54965 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rnf13O54965 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf13O54965 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf13O54965 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf13O54965 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf13O54965 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.52□□□□□ -0.41
Rnf13O54965 Gm20553-201ENSMUST00000204205 844 ntBASIC12.52□□□□□ -0.41
Rnf13O54965 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf13O54965 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf13O54965 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf13O54965 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.52□□□□□ -0.41
Rnf13O54965 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf13O54965 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms