Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav8-1A0A075B641 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav8-1A0A075B641 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Gm14042-201ENSMUST00000120139 833 ntBASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav8-1A0A075B641 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gm8097-201ENSMUST00000117903 829 ntBASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav8-1A0A075B641 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms