Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.27■□□□□ 0.52
VPS52Q8N1B4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 SPCS2P1-201ENST00000561636 679 ntBASIC18.27■□□□□ 0.52
VPS52Q8N1B4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 LINC00628-201ENST00000628516 1289 ntBASIC18.27■□□□□ 0.52
VPS52Q8N1B4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS52Q8N1B4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 AC084018.2-201ENST00000613093 2607 ntBASIC18.27■□□□□ 0.51
VPS52Q8N1B4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
VPS52Q8N1B4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 AL645608.8-201ENST00000606034 2086 ntBASIC18.26■□□□□ 0.51
VPS52Q8N1B4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 ADH5P3-201ENST00000433842 1137 ntBASIC18.26■□□□□ 0.51
VPS52Q8N1B4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.26■□□□□ 0.51
VPS52Q8N1B4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VPS52Q8N1B4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 LINC01451-201ENST00000623792 534 ntBASIC18.25■□□□□ 0.51
VPS52Q8N1B4 AC141586.5-201ENST00000624546 2050 ntBASIC18.25■□□□□ 0.51
VPS52Q8N1B4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VPS52Q8N1B4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.24■□□□□ 0.51
VPS52Q8N1B4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms