Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Grk6-205ENSMUST00000224653 2976 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm29310-201ENSMUST00000185468 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21825-201ENSMUST00000185728 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm29109-201ENSMUST00000185895 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21896-201ENSMUST00000186520 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21873-201ENSMUST00000186728 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21794-201ENSMUST00000187056 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21880-201ENSMUST00000187275 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21826-201ENSMUST00000187451 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21198-201ENSMUST00000188393 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21749-201ENSMUST00000189343 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21901-201ENSMUST00000189568 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm29424-201ENSMUST00000189716 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm28599-201ENSMUST00000189838 694 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21867-201ENSMUST00000189917 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm29269-201ENSMUST00000190087 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21722-201ENSMUST00000190153 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm28423-201ENSMUST00000190701 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21899-201ENSMUST00000190745 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21910-201ENSMUST00000191163 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21849-201ENSMUST00000191571 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm28678-201ENSMUST00000191593 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm20910-201ENSMUST00000193268 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21871-201ENSMUST00000194621 696 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcd3Q6P9Z1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcd3Q6P9Z1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd3Q6P9Z1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms