Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SgcaP82350 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SgcaP82350 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
SgcaP82350 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcaP82350 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gm25990-201ENSMUST00000102440 86 ntBASIC11.62□□□□□ -0.55
SgcaP82350 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcaP82350 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gm25925-201ENSMUST00000158314 306 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SgcaP82350 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.62□□□□□ -0.55
SgcaP82350 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcaP82350 Gm44357-201ENSMUST00000195897 142 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm19658-201ENSMUST00000196231 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44367-201ENSMUST00000196836 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44350-201ENSMUST00000197197 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44390-201ENSMUST00000197533 144 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44313-201ENSMUST00000198018 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44486-201ENSMUST00000198508 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44314-201ENSMUST00000199263 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44394-201ENSMUST00000199558 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44484-201ENSMUST00000199873 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44466-201ENSMUST00000200264 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm44359-201ENSMUST00000200671 138 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SgcaP82350 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.62□□□□□ -0.55
SgcaP82350 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.62□□□□□ -0.55
SgcaP82350 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.62□□□□□ -0.55
SgcaP82350 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SgcaP82350 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SgcaP82350 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
SgcaP82350 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcaP82350 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcaP82350 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
SgcaP82350 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.61□□□□□ -0.55
SgcaP82350 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SgcaP82350 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcaP82350 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcaP82350 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcaP82350 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcaP82350 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcaP82350 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcaP82350 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcaP82350 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcaP82350 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms