Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VTNP04004 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.38■□□□□ 0.53
VTNP04004 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.38■□□□□ 0.53
VTNP04004 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.38■□□□□ 0.53
VTNP04004 SPDYE14P-201ENST00000442619 822 ntBASIC18.38■□□□□ 0.53
VTNP04004 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.38■□□□□ 0.53
VTNP04004 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.38■□□□□ 0.53
VTNP04004 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VTNP04004 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.38■□□□□ 0.53
VTNP04004 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.38■□□□□ 0.53
VTNP04004 AC026150.2-201ENST00000564693 1156 ntBASIC18.38■□□□□ 0.53
VTNP04004 AP000842.3-202ENST00000569238 1080 ntBASIC18.38■□□□□ 0.53
VTNP04004 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VTNP04004 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.38■□□□□ 0.53
VTNP04004 AC084121.4-201ENST00000641598 221 ntBASIC18.38■□□□□ 0.53
VTNP04004 AF228730.8-201ENST00000642140 221 ntBASIC18.38■□□□□ 0.53
VTNP04004 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.38■□□□□ 0.53
VTNP04004 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.38■□□□□ 0.53
VTNP04004 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VTNP04004 AC006277.1-201ENST00000624348 1610 ntBASIC18.38■□□□□ 0.53
VTNP04004 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VTNP04004 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 AC060834.1-201ENST00000443027 2032 ntBASIC18.37■□□□□ 0.53
VTNP04004 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 CNN2P2-201ENST00000443536 909 ntBASIC18.37■□□□□ 0.53
VTNP04004 CNN2P3-201ENST00000450201 906 ntBASIC18.37■□□□□ 0.53
VTNP04004 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.37■□□□□ 0.53
VTNP04004 AC069262.1-201ENST00000539058 672 ntBASIC18.37■□□□□ 0.53
VTNP04004 AL512356.2-201ENST00000546955 174 ntBASIC18.37■□□□□ 0.53
VTNP04004 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
VTNP04004 AC015911.4-201ENST00000588022 1070 ntBASIC18.37■□□□□ 0.53
VTNP04004 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 AC011467.4-201ENST00000594891 528 ntBASIC18.37■□□□□ 0.53
VTNP04004 AL390955.2-201ENST00000603032 514 ntBASIC18.37■□□□□ 0.53
VTNP04004 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.37■□□□□ 0.53
VTNP04004 AL136317.3-201ENST00000618497 906 ntBASIC18.37■□□□□ 0.53
VTNP04004 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.37■□□□□ 0.53
VTNP04004 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 AC008677.1-201ENST00000519230 1561 ntBASIC18.37■□□□□ 0.53
VTNP04004 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
VTNP04004 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.37■□□□□ 0.53
VTNP04004 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VTNP04004 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.36■□□□□ 0.53
VTNP04004 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.36■□□□□ 0.53
VTNP04004 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.36■□□□□ 0.53
VTNP04004 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 TUBB3P1-201ENST00000405796 1332 ntBASIC18.36■□□□□ 0.53
VTNP04004 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VTNP04004 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.36■□□□□ 0.53
VTNP04004 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTNP04004 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms