Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nipsnap3bQ9CQE1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm5264-201ENSMUST00000190584 848 ntBASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 AW822252-206ENSMUST00000208904 237 ntBASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.68□□□□□ -0.22
Nipsnap3bQ9CQE1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm25911-201ENSMUST00000157621 56 ntBASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm27525-201ENSMUST00000184465 107 ntBASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nipsnap3bQ9CQE1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms