Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm9824-201ENSMUST00000178707 561 ntBASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf111Q99ML9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm18049-201ENSMUST00000208909 581 ntBASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf111Q99ML9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf111Q99ML9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf111Q99ML9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf111Q99ML9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf111Q99ML9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms