Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm18246-201ENSMUST00000221023 728 ntBASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb3Q91XZ7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb3Q91XZ7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb3Q91XZ7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms