Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gm4804-201ENSMUST00000182234 999 ntBASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lhx9Q9WUH2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lhx9Q9WUH2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Gm5354-201ENSMUST00000182417 973 ntBASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx9Q9WUH2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Mir497b-201ENSMUST00000093601 125 ntBASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx9Q9WUH2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms