Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
TTC9Q92623 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9Q92623 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9Q92623 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TTC9Q92623 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9Q92623 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9Q92623 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TTC9Q92623 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC9Q92623 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9Q92623 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TTC9Q92623 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 AC134043.2-201ENST00000624206 2238 ntBASIC16.11■□□□□ 0.17
TTC9Q92623 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TTC9Q92623 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TTC9Q92623 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.11■□□□□ 0.17
TTC9Q92623 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TTC9Q92623 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.11■□□□□ 0.17
TTC9Q92623 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC9Q92623 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
TTC9Q92623 AC051619.7-201ENST00000568314 623 ntBASIC16.11■□□□□ 0.17
TTC9Q92623 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
TTC9Q92623 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.11■□□□□ 0.17
TTC9Q92623 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC9Q92623 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC9Q92623 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC9Q92623 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TTC9Q92623 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TTC9Q92623 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 KLF4P1-201ENST00000412782 1185 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 CNN2P2-201ENST00000443536 909 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 CNN2P3-201ENST00000450201 906 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.1■□□□□ 0.17
TTC9Q92623 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 STK25P1-201ENST00000585406 838 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.1■□□□□ 0.17
TTC9Q92623 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.1■□□□□ 0.17
TTC9Q92623 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC9Q92623 AL136317.3-201ENST00000618497 906 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TTC9Q92623 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.1■□□□□ 0.17
TTC9Q92623 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TTC9Q92623 OR6D1P-202ENST00000641007 5290 ntBASIC16.1■□□□□ 0.17
TTC9Q92623 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TTC9Q92623 FLJ38576-201ENST00000623820 2459 ntBASIC16.09■□□□□ 0.17
TTC9Q92623 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC9Q92623 AL355312.1-201ENST00000407115 2176 ntBASIC16.09■□□□□ 0.17
TTC9Q92623 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.09■□□□□ 0.17
TTC9Q92623 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms