Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm25287-201ENSMUST00000103846 110 ntBASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm22918-201ENSMUST00000103855 110 ntBASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gm26308-201ENSMUST00000157768 69 ntBASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac1Q91Y10 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac1Q91Y10 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm44335-201ENSMUST00000196879 141 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm44297-201ENSMUST00000198304 141 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm44346-201ENSMUST00000198851 141 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm43125-201ENSMUST00000201724 730 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms