Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc87Q8CDL9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc87Q8CDL9 Gm6973-201ENSMUST00000117080 721 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Gm12882-201ENSMUST00000121696 517 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Mir6990-201ENSMUST00000183724 91 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Gm8396-201ENSMUST00000057361 823 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc87Q8CDL9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc87Q8CDL9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms