Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.59□□□□□ -0.55
Tff1Q08423 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.59□□□□□ -0.55
Tff1Q08423 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tff1Q08423 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.59□□□□□ -0.55
Tff1Q08423 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.59□□□□□ -0.55
Tff1Q08423 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tff1Q08423 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Tff1Q08423 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Tff1Q08423 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tff1Q08423 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.58□□□□□ -0.56
Tff1Q08423 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Gm27920-201ENSMUST00000183953 96 ntBASIC11.58□□□□□ -0.56
Tff1Q08423 Gm10253-201ENSMUST00000194270 940 ntBASIC11.58□□□□□ -0.56
Tff1Q08423 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.58□□□□□ -0.56
Tff1Q08423 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tff1Q08423 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tff1Q08423 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tff1Q08423 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 Gm24158-201ENSMUST00000175263 71 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Tff1Q08423 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Tff1Q08423 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.57□□□□□ -0.56
Tff1Q08423 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tff1Q08423 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms