Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.99□□□□□ -0.49
Tram1Q91V04 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.99□□□□□ -0.49
Tram1Q91V04 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.99□□□□□ -0.49
Tram1Q91V04 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tram1Q91V04 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tram1Q91V04 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm7284-201ENSMUST00000131667 944 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm2445-201ENSMUST00000182798 989 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.98□□□□□ -0.49
Tram1Q91V04 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm44719-201ENSMUST00000206404 149 ntBASIC11.98□□□□□ -0.49
Tram1Q91V04 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.98□□□□□ -0.49
Tram1Q91V04 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tram1Q91V04 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tram1Q91V04 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.97□□□□□ -0.49
Tram1Q91V04 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm12882-201ENSMUST00000121696 517 ntBASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm5479-201ENSMUST00000160578 435 ntBASIC11.97□□□□□ -0.49
Tram1Q91V04 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Gm10252-201ENSMUST00000209541 832 ntBASIC11.97□□□□□ -0.49
Tram1Q91V04 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.97□□□□□ -0.49
Tram1Q91V04 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.97□□□□□ -0.49
Tram1Q91V04 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tram1Q91V04 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tram1Q91V04 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms