Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.03□□□□□ -0.64
Efnb3O35393 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.03□□□□□ -0.64
Efnb3O35393 Gm27300-201ENSMUST00000184085 97 ntBASIC11.03□□□□□ -0.64
Efnb3O35393 Gm27335-201ENSMUST00000184758 97 ntBASIC11.03□□□□□ -0.64
Efnb3O35393 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.03□□□□□ -0.64
Efnb3O35393 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.03□□□□□ -0.64
Efnb3O35393 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Efnb3O35393 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Efnb3O35393 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Efnb3O35393 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Efnb3O35393 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Efnb3O35393 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Efnb3O35393 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.02□□□□□ -0.65
Efnb3O35393 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Efnb3O35393 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Efnb3O35393 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Gm16198-201ENSMUST00000118766 670 ntBASIC11.02□□□□□ -0.65
Efnb3O35393 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.02□□□□□ -0.65
Efnb3O35393 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.02□□□□□ -0.65
Efnb3O35393 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.02□□□□□ -0.65
Efnb3O35393 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.02□□□□□ -0.65
Efnb3O35393 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Efnb3O35393 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Efnb3O35393 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Efnb3O35393 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Efnb3O35393 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms