Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccnb1ip1D3Z3K2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm10013-201ENSMUST00000106074 672 ntBASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm37055-201ENSMUST00000191866 133 ntBASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm5587-201ENSMUST00000206270 674 ntBASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm6296-201ENSMUST00000222599 943 ntBASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccnb1ip1D3Z3K2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccnb1ip1D3Z3K2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms