Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp1b1Q99LU0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Gm8396-201ENSMUST00000057361 823 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp1b1Q99LU0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Gm5312-201ENSMUST00000203728 547 ntBASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp1b1Q99LU0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp1b1Q99LU0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp1b1Q99LU0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms