Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm1Q8VC85 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Gm25287-201ENSMUST00000103846 110 ntBASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Gm22918-201ENSMUST00000103855 110 ntBASIC13.4□□□□□ -0.26
Lsm1Q8VC85 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm1Q8VC85 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lsm1Q8VC85 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lsm1Q8VC85 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.4□□□□□ -0.27
Lsm1Q8VC85 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Mir125a-201ENSMUST00000083545 68 ntBASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm1Q8VC85 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Gm9824-201ENSMUST00000178707 561 ntBASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm1Q8VC85 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 424.8 ms