Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Gm15483-201ENSMUST00000120338 456 ntBASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Gm2445-201ENSMUST00000182798 989 ntBASIC11.4□□□□□ -0.58
Nup35Q8R4R6 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup35Q8R4R6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup35Q8R4R6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gm5177-201ENSMUST00000183092 997 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gm27628-201ENSMUST00000184911 107 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gm15590-201ENSMUST00000078419 552 ntBASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup35Q8R4R6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.38□□□□□ -0.59
Nup35Q8R4R6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Gm24589-201ENSMUST00000116692 94 ntBASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Gm44608-201ENSMUST00000206827 855 ntBASIC11.38□□□□□ -0.59
Nup35Q8R4R6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup35Q8R4R6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms