Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gm16198-201ENSMUST00000118766 670 ntBASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc28bQ8CEG5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Pck2-205ENSMUST00000226352 2784 ntBASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc28bQ8CEG5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc28bQ8CEG5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc28bQ8CEG5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc28bQ8CEG5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms