Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox6P40645 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox6P40645 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Gm6973-201ENSMUST00000117080 721 ntBASIC13.13□□□□□ -0.31
Sox6P40645 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox6P40645 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox6P40645 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Gm18057-201ENSMUST00000208220 503 ntBASIC13.13□□□□□ -0.31
Sox6P40645 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.13□□□□□ -0.31
Sox6P40645 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.13□□□□□ -0.31
Sox6P40645 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.13□□□□□ -0.31
Sox6P40645 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.13□□□□□ -0.31
Sox6P40645 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox6P40645 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox6P40645 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox6P40645 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox6P40645 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.12□□□□□ -0.31
Sox6P40645 Gm8749-201ENSMUST00000117737 331 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.12□□□□□ -0.31
Sox6P40645 Gm15483-201ENSMUST00000120338 456 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Gm11745-201ENSMUST00000121669 448 ntBASIC13.12□□□□□ -0.31
Sox6P40645 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox6P40645 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.12□□□□□ -0.31
Sox6P40645 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox6P40645 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox6P40645 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox6P40645 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox6P40645 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox6P40645 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox6P40645 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox6P40645 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms