Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Casp6O08738 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Casp6O08738 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.95□□□□□ -0.5
Casp6O08738 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Casp6O08738 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.95□□□□□ -0.5
Casp6O08738 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Gm11814-201ENSMUST00000119515 929 ntBASIC11.95□□□□□ -0.5
Casp6O08738 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.95□□□□□ -0.5
Casp6O08738 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.95□□□□□ -0.5
Casp6O08738 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.95□□□□□ -0.5
Casp6O08738 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Casp6O08738 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Gm19078-201ENSMUST00000206311 727 ntBASIC11.95□□□□□ -0.5
Casp6O08738 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.95□□□□□ -0.5
Casp6O08738 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.95□□□□□ -0.5
Casp6O08738 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.95□□□□□ -0.5
Casp6O08738 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Casp6O08738 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Casp6O08738 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Casp6O08738 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Casp6O08738 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Casp6O08738 Gm12928-201ENSMUST00000117115 573 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm12957-201ENSMUST00000117835 377 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm12390-201ENSMUST00000117897 397 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm15240-201ENSMUST00000118156 720 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Casp6O08738 Gm8927-201ENSMUST00000181978 981 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm27847-201ENSMUST00000183711 107 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Gm27375-201ENSMUST00000183799 107 ntBASIC11.94□□□□□ -0.5
Casp6O08738 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Gm3222-201ENSMUST00000071282 990 ntBASIC11.94□□□□□ -0.5
Casp6O08738 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Casp6O08738 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.94□□□□□ -0.5
Casp6O08738 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Casp6O08738 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.93□□□□□ -0.5
Casp6O08738 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Casp6O08738 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Gm43094-201ENSMUST00000196549 921 ntBASIC11.93□□□□□ -0.5
Casp6O08738 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms