Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nrip3Q9JJR9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.7■□□□□ 0.74
Nrip3Q9JJR9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nrip3Q9JJR9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nrip3Q9JJR9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nrip3Q9JJR9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nrip3Q9JJR9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nrip3Q9JJR9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nrip3Q9JJR9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nrip3Q9JJR9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nrip3Q9JJR9 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.67■□□□□ 0.74
Nrip3Q9JJR9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.66■□□□□ 0.74
Nrip3Q9JJR9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nrip3Q9JJR9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nrip3Q9JJR9 Mir3960-201ENSMUST00000198213 73 ntBASIC19.66■□□□□ 0.74
Nrip3Q9JJR9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Terc-201ENSMUST00000082862 423 ntBASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.65■□□□□ 0.74
Nrip3Q9JJR9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nrip3Q9JJR9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nrip3Q9JJR9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nrip3Q9JJR9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.62■□□□□ 0.73
Nrip3Q9JJR9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nrip3Q9JJR9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrip3Q9JJR9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
Nrip3Q9JJR9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrip3Q9JJR9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Nrip3Q9JJR9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrip3Q9JJR9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrip3Q9JJR9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Nrip3Q9JJR9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nrip3Q9JJR9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nrip3Q9JJR9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Gm45364-201ENSMUST00000210883 159 ntBASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrip3Q9JJR9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrip3Q9JJR9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.56■□□□□ 0.72
Nrip3Q9JJR9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nrip3Q9JJR9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrip3Q9JJR9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms