Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.83■■□□□ 1.57
Pcdhgc5Q91XW9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.82■■□□□ 1.56
Pcdhgc5Q91XW9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgc5Q91XW9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Pcdhgc5Q91XW9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Pcdhgc5Q91XW9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgc5Q91XW9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdhgc5Q91XW9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgc5Q91XW9 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.8■■□□□ 1.56
Pcdhgc5Q91XW9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgc5Q91XW9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Pcdhgc5Q91XW9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgc5Q91XW9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgc5Q91XW9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgc5Q91XW9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgc5Q91XW9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Pcdhgc5Q91XW9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.79■■□□□ 1.56
Pcdhgc5Q91XW9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgc5Q91XW9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.78■■□□□ 1.56
Pcdhgc5Q91XW9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgc5Q91XW9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgc5Q91XW9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.75■■□□□ 1.55
Pcdhgc5Q91XW9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgc5Q91XW9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgc5Q91XW9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhgc5Q91XW9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhgc5Q91XW9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcdhgc5Q91XW9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhgc5Q91XW9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhgc5Q91XW9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Etf1-202ENSMUST00000180351 108 ntBASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Pcdhgc5Q91XW9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhgc5Q91XW9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgc5Q91XW9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhgc5Q91XW9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhgc5Q91XW9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgc5Q91XW9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.69■■□□□ 1.54
Pcdhgc5Q91XW9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 Gm10232-201ENSMUST00000089221 720 ntBASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgc5Q91XW9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgc5Q91XW9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgc5Q91XW9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgc5Q91XW9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgc5Q91XW9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcdhgc5Q91XW9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgc5Q91XW9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms