Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40cQ8VHQ4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40cQ8VHQ4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.72■□□□□ 0.43
Rab40cQ8VHQ4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rab40cQ8VHQ4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rab40cQ8VHQ4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rab40cQ8VHQ4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40cQ8VHQ4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40cQ8VHQ4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab40cQ8VHQ4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40cQ8VHQ4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40cQ8VHQ4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40cQ8VHQ4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40cQ8VHQ4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab40cQ8VHQ4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40cQ8VHQ4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Rab40cQ8VHQ4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40cQ8VHQ4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab40cQ8VHQ4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rab40cQ8VHQ4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab40cQ8VHQ4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab40cQ8VHQ4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40cQ8VHQ4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40cQ8VHQ4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40cQ8VHQ4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.64■□□□□ 0.41
Rab40cQ8VHQ4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rab40cQ8VHQ4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab40cQ8VHQ4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40cQ8VHQ4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.63■□□□□ 0.41
Rab40cQ8VHQ4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40cQ8VHQ4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.61■□□□□ 0.41
Rab40cQ8VHQ4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rab40cQ8VHQ4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rab40cQ8VHQ4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40cQ8VHQ4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms