Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.69■■□□□ 1.06
Nudcd3Q8R1N4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nudcd3Q8R1N4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nudcd3Q8R1N4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nudcd3Q8R1N4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nudcd3Q8R1N4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Nudcd3Q8R1N4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.68■■□□□ 1.06
Nudcd3Q8R1N4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nudcd3Q8R1N4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Gm6821-201ENSMUST00000107540 542 ntBASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nudcd3Q8R1N4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Gm22567-201ENSMUST00000175542 342 ntBASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nudcd3Q8R1N4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nudcd3Q8R1N4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nudcd3Q8R1N4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nudcd3Q8R1N4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nudcd3Q8R1N4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.64■■□□□ 1.05
Nudcd3Q8R1N4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nudcd3Q8R1N4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Gm9812-201ENSMUST00000061934 968 ntBASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nudcd3Q8R1N4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Nudcd3Q8R1N4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nudcd3Q8R1N4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nudcd3Q8R1N4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nudcd3Q8R1N4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Nudcd3Q8R1N4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Nudcd3Q8R1N4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nudcd3Q8R1N4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nudcd3Q8R1N4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nudcd3Q8R1N4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nudcd3Q8R1N4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nudcd3Q8R1N4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nudcd3Q8R1N4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nudcd3Q8R1N4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.56■■□□□ 1.04
Nudcd3Q8R1N4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.56■■□□□ 1.04
Nudcd3Q8R1N4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nudcd3Q8R1N4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.56■■□□□ 1.04
Nudcd3Q8R1N4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms