Protein–RNA interactions for Protein: Q8K4M5

Commd1, COMM domain-containing protein 1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd1Q8K4M5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Commd1Q8K4M5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.84■□□□□ 0.61
Commd1Q8K4M5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Commd1Q8K4M5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Commd1Q8K4M5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Commd1Q8K4M5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.83■□□□□ 0.61
Commd1Q8K4M5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Commd1Q8K4M5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Commd1Q8K4M5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Commd1Q8K4M5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Commd1Q8K4M5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd1Q8K4M5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd1Q8K4M5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd1Q8K4M5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Commd1Q8K4M5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Commd1Q8K4M5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Commd1Q8K4M5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.79■□□□□ 0.6
Commd1Q8K4M5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Commd1Q8K4M5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Commd1Q8K4M5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Commd1Q8K4M5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Commd1Q8K4M5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Commd1Q8K4M5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Commd1Q8K4M5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Commd1Q8K4M5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Commd1Q8K4M5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Commd1Q8K4M5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Commd1Q8K4M5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Gm5921-201ENSMUST00000075898 882 ntBASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Commd1Q8K4M5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Commd1Q8K4M5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Commd1Q8K4M5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Commd1Q8K4M5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Commd1Q8K4M5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Commd1Q8K4M5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Commd1Q8K4M5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Commd1Q8K4M5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Commd1Q8K4M5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.7■□□□□ 0.58
Commd1Q8K4M5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Commd1Q8K4M5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Commd1Q8K4M5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Commd1Q8K4M5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Commd1Q8K4M5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms