Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cystm1Q8K353 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.57□□□□□ -0.24
Cystm1Q8K353 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.57□□□□□ -0.24
Cystm1Q8K353 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Gm11599-201ENSMUST00000118720 878 ntBASIC13.56□□□□□ -0.24
Cystm1Q8K353 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cystm1Q8K353 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cystm1Q8K353 AC153524.1-201ENSMUST00000220436 1935 ntBASIC13.55□□□□□ -0.24
Cystm1Q8K353 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cystm1Q8K353 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cystm1Q8K353 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cystm1Q8K353 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cystm1Q8K353 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cystm1Q8K353 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cystm1Q8K353 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC13.54□□□□□ -0.24
Cystm1Q8K353 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC13.54□□□□□ -0.24
Cystm1Q8K353 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cystm1Q8K353 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.54□□□□□ -0.24
Cystm1Q8K353 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.53□□□□□ -0.24
Cystm1Q8K353 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cystm1Q8K353 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cystm1Q8K353 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.51□□□□□ -0.25
Cystm1Q8K353 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cystm1Q8K353 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.5□□□□□ -0.25
Cystm1Q8K353 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.5□□□□□ -0.25
Cystm1Q8K353 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Cystm1Q8K353 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC13.5□□□□□ -0.25
Cystm1Q8K353 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cystm1Q8K353 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cystm1Q8K353 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms