Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cabcoco1Q8CDT7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cabcoco1Q8CDT7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cabcoco1Q8CDT7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cabcoco1Q8CDT7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cabcoco1Q8CDT7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cabcoco1Q8CDT7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Cabcoco1Q8CDT7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cabcoco1Q8CDT7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cabcoco1Q8CDT7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Cabcoco1Q8CDT7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cabcoco1Q8CDT7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cabcoco1Q8CDT7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cabcoco1Q8CDT7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cabcoco1Q8CDT7 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.25■□□□□ 0.99
Cabcoco1Q8CDT7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cabcoco1Q8CDT7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cabcoco1Q8CDT7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cabcoco1Q8CDT7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cabcoco1Q8CDT7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.22■□□□□ 0.99
Cabcoco1Q8CDT7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cabcoco1Q8CDT7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cabcoco1Q8CDT7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cabcoco1Q8CDT7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cabcoco1Q8CDT7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cabcoco1Q8CDT7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cabcoco1Q8CDT7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cabcoco1Q8CDT7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cabcoco1Q8CDT7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cabcoco1Q8CDT7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cabcoco1Q8CDT7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cabcoco1Q8CDT7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cabcoco1Q8CDT7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cabcoco1Q8CDT7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.16■□□□□ 0.98
Cabcoco1Q8CDT7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.16■□□□□ 0.98
Cabcoco1Q8CDT7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.16■□□□□ 0.98
Cabcoco1Q8CDT7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cabcoco1Q8CDT7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cabcoco1Q8CDT7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cabcoco1Q8CDT7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cabcoco1Q8CDT7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms