Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pabpc5Q8C7D3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pabpc5Q8C7D3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pabpc5Q8C7D3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.69■■□□□ 1.06
Pabpc5Q8C7D3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pabpc5Q8C7D3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pabpc5Q8C7D3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpc5Q8C7D3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpc5Q8C7D3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pabpc5Q8C7D3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpc5Q8C7D3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpc5Q8C7D3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Pabpc5Q8C7D3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pabpc5Q8C7D3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Rps24-207ENSMUST00000224568 714 ntBASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pabpc5Q8C7D3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pabpc5Q8C7D3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpc5Q8C7D3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pabpc5Q8C7D3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pabpc5Q8C7D3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pabpc5Q8C7D3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pabpc5Q8C7D3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pabpc5Q8C7D3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pabpc5Q8C7D3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pabpc5Q8C7D3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.6■■□□□ 1.05
Pabpc5Q8C7D3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.6■■□□□ 1.05
Pabpc5Q8C7D3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pabpc5Q8C7D3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pabpc5Q8C7D3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.59■■□□□ 1.05
Pabpc5Q8C7D3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpc5Q8C7D3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpc5Q8C7D3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.58■■□□□ 1.05
Pabpc5Q8C7D3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pabpc5Q8C7D3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.58■■□□□ 1.05
Pabpc5Q8C7D3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pabpc5Q8C7D3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pabpc5Q8C7D3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms