Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp2bQ8BJF9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Chmp2bQ8BJF9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp2bQ8BJF9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Chmp2bQ8BJF9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp2bQ8BJF9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp2bQ8BJF9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp2bQ8BJF9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp2bQ8BJF9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Chmp2bQ8BJF9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.14■■□□□ 1.13
Chmp2bQ8BJF9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.13■■□□□ 1.13
Chmp2bQ8BJF9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.12■■□□□ 1.13
Chmp2bQ8BJF9 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.12■■□□□ 1.13
Chmp2bQ8BJF9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp2bQ8BJF9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp2bQ8BJF9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp2bQ8BJF9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp2bQ8BJF9 Gm22567-201ENSMUST00000175542 342 ntBASIC22.11■■□□□ 1.13
Chmp2bQ8BJF9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Chmp2bQ8BJF9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.1■■□□□ 1.13
Chmp2bQ8BJF9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Chmp2bQ8BJF9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chmp2bQ8BJF9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Chmp2bQ8BJF9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Chmp2bQ8BJF9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chmp2bQ8BJF9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Chmp2bQ8BJF9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Chmp2bQ8BJF9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Chmp2bQ8BJF9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.07■■□□□ 1.12
Chmp2bQ8BJF9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Chmp2bQ8BJF9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp2bQ8BJF9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chmp2bQ8BJF9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms