Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Csmd3Q80T79 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Csmd3Q80T79 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Csmd3Q80T79 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.31■□□□□ 0.04
Csmd3Q80T79 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Csmd3Q80T79 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.3■□□□□ 0.04
Csmd3Q80T79 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Csmd3Q80T79 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Csmd3Q80T79 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Gm40881-201ENSMUST00000223397 166 ntBASIC15.28■□□□□ 0.04
Csmd3Q80T79 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Csmd3Q80T79 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Csmd3Q80T79 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Csmd3Q80T79 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Csmd3Q80T79 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.27■□□□□ 0.03
Csmd3Q80T79 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Csmd3Q80T79 Gm8495-201ENSMUST00000188740 694 ntBASIC15.27■□□□□ 0.03
Csmd3Q80T79 Gm45417-201ENSMUST00000209533 758 ntBASIC15.27■□□□□ 0.03
Csmd3Q80T79 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Csmd3Q80T79 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Csmd3Q80T79 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Csmd3Q80T79 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Csmd3Q80T79 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Csmd3Q80T79 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Csmd3Q80T79 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Csmd3Q80T79 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.25■□□□□ 0.03
Csmd3Q80T79 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.24■□□□□ 0.03
Csmd3Q80T79 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Csmd3Q80T79 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.24■□□□□ 0.03
Csmd3Q80T79 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Csmd3Q80T79 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.24■□□□□ 0.03
Csmd3Q80T79 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Csmd3Q80T79 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.24■□□□□ 0.03
Csmd3Q80T79 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Csmd3Q80T79 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Csmd3Q80T79 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Csmd3Q80T79 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Csmd3Q80T79 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Csmd3Q80T79 Gm18284-201ENSMUST00000172604 624 ntBASIC15.22■□□□□ 0.03
Csmd3Q80T79 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Csmd3Q80T79 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Gm29257-201ENSMUST00000186115 639 ntBASIC15.22■□□□□ 0.03
Csmd3Q80T79 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.22■□□□□ 0.03
Csmd3Q80T79 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.22■□□□□ 0.03
Csmd3Q80T79 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Csmd3Q80T79 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.21■□□□□ 0.03
Csmd3Q80T79 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Csmd3Q80T79 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Csmd3Q80T79 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.21■□□□□ 0.03
Csmd3Q80T79 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Csmd3Q80T79 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.21■□□□□ 0.03
Csmd3Q80T79 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.21■□□□□ 0.03
Csmd3Q80T79 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Csmd3Q80T79 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.21■□□□□ 0.02
Csmd3Q80T79 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC15.2■□□□□ 0.02
Csmd3Q80T79 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Csmd3Q80T79 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.2■□□□□ 0.02
Csmd3Q80T79 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Csmd3Q80T79 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Csmd3Q80T79 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Csmd3Q80T79 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.2■□□□□ 0.02
Csmd3Q80T79 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms