Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.36■■□□□ 1.97
Col11a2Q64739 Appbp2os-202ENSMUST00000206972 447 ntBASIC27.36■■□□□ 1.97
Col11a2Q64739 AC140930.3-201ENSMUST00000222935 274 ntBASIC27.36■■□□□ 1.97
Col11a2Q64739 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC27.36■■□□□ 1.97
Col11a2Q64739 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.36■■□□□ 1.97
Col11a2Q64739 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col11a2Q64739 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC27.35■■□□□ 1.97
Col11a2Q64739 Gm45417-201ENSMUST00000209533 758 ntBASIC27.35■■□□□ 1.97
Col11a2Q64739 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col11a2Q64739 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Col11a2Q64739 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.34■■□□□ 1.97
Col11a2Q64739 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.34■■□□□ 1.97
Col11a2Q64739 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col11a2Q64739 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Col11a2Q64739 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col11a2Q64739 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col11a2Q64739 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Col11a2Q64739 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.32■■□□□ 1.96
Col11a2Q64739 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col11a2Q64739 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Col11a2Q64739 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col11a2Q64739 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col11a2Q64739 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col11a2Q64739 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Col11a2Q64739 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Col11a2Q64739 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Col11a2Q64739 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col11a2Q64739 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Col11a2Q64739 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col11a2Q64739 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Col11a2Q64739 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col11a2Q64739 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col11a2Q64739 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col11a2Q64739 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC27.27■■□□□ 1.96
Col11a2Q64739 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col11a2Q64739 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col11a2Q64739 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col11a2Q64739 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC27.27■■□□□ 1.96
Col11a2Q64739 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col11a2Q64739 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col11a2Q64739 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col11a2Q64739 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.26■■□□□ 1.95
Col11a2Q64739 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Col11a2Q64739 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC27.26■■□□□ 1.95
Col11a2Q64739 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col11a2Q64739 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col11a2Q64739 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col11a2Q64739 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Col11a2Q64739 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC27.25■■□□□ 1.95
Col11a2Q64739 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col11a2Q64739 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col11a2Q64739 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.24■■□□□ 1.95
Col11a2Q64739 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col11a2Q64739 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC27.24■■□□□ 1.95
Col11a2Q64739 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.23■■□□□ 1.95
Col11a2Q64739 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Col11a2Q64739 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Col11a2Q64739 Gm10399-202ENSMUST00000202768 748 ntBASIC27.22■■□□□ 1.95
Col11a2Q64739 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col11a2Q64739 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col11a2Q64739 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col11a2Q64739 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col11a2Q64739 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col11a2Q64739 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col11a2Q64739 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Col11a2Q64739 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Col11a2Q64739 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Col11a2Q64739 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.95
Col11a2Q64739 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Col11a2Q64739 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Col11a2Q64739 AC117245.4-201ENSMUST00000217388 1646 ntBASIC27.19■■□□□ 1.94
Col11a2Q64739 Gm12821-201ENSMUST00000120022 600 ntBASIC27.19■■□□□ 1.94
Col11a2Q64739 Gm11847-201ENSMUST00000125165 1119 ntBASIC27.19■■□□□ 1.94
Col11a2Q64739 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col11a2Q64739 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC27.19■■□□□ 1.94
Col11a2Q64739 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col11a2Q64739 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col11a2Q64739 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col11a2Q64739 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Col11a2Q64739 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col11a2Q64739 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Col11a2Q64739 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.17■■□□□ 1.94
Col11a2Q64739 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC27.16■■□□□ 1.94
Col11a2Q64739 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.16■■□□□ 1.94
Col11a2Q64739 Gm8093-201ENSMUST00000128935 1892 ntBASIC27.16■■□□□ 1.94
Col11a2Q64739 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col11a2Q64739 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col11a2Q64739 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col11a2Q64739 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC27.16■■□□□ 1.94
Col11a2Q64739 Slc35b2-207ENSMUST00000226086 850 ntBASIC27.16■■□□□ 1.94
Col11a2Q64739 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Col11a2Q64739 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col11a2Q64739 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col11a2Q64739 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col11a2Q64739 Golgb1-201ENSMUST00000023534 498 ntBASIC27.15■■□□□ 1.94
Col11a2Q64739 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.14■■□□□ 1.94
Col11a2Q64739 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Col11a2Q64739 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Col11a2Q64739 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Col11a2Q64739 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms