Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.3■■□□□ 1.32
Tbc1d1Q60949 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tbc1d1Q60949 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Tbc1d1Q60949 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tbc1d1Q60949 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tbc1d1Q60949 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Tbc1d1Q60949 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Tbc1d1Q60949 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tbc1d1Q60949 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
Tbc1d1Q60949 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tbc1d1Q60949 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tbc1d1Q60949 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tbc1d1Q60949 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Tbc1d1Q60949 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tbc1d1Q60949 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Tbc1d1Q60949 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Tbc1d1Q60949 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tbc1d1Q60949 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tbc1d1Q60949 Gm10232-201ENSMUST00000089221 720 ntBASIC23.24■■□□□ 1.31
Tbc1d1Q60949 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tbc1d1Q60949 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Tbc1d1Q60949 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Tbc1d1Q60949 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Gm13241-201ENSMUST00000094493 780 ntBASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tbc1d1Q60949 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tbc1d1Q60949 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tbc1d1Q60949 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Tbc1d1Q60949 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.2■■□□□ 1.3
Tbc1d1Q60949 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tbc1d1Q60949 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.2■■□□□ 1.3
Tbc1d1Q60949 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.2■■□□□ 1.3
Tbc1d1Q60949 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tbc1d1Q60949 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tbc1d1Q60949 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tbc1d1Q60949 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.19■■□□□ 1.3
Tbc1d1Q60949 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tbc1d1Q60949 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tbc1d1Q60949 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Tbc1d1Q60949 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tbc1d1Q60949 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tbc1d1Q60949 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Tbc1d1Q60949 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tbc1d1Q60949 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tbc1d1Q60949 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Tbc1d1Q60949 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tbc1d1Q60949 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbc1d1Q60949 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms