Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav2Q5R1I9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Gm15820-201ENSMUST00000201566 728 ntBASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav2Q5R1I9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav2Q5R1I9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav2Q5R1I9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav2Q5R1I9 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.27■□□□□ 0.35
Trav2Q5R1I9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav2Q5R1I9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav2Q5R1I9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav2Q5R1I9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav2Q5R1I9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav2Q5R1I9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.24■□□□□ 0.35
Trav2Q5R1I9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav2Q5R1I9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav2Q5R1I9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav2Q5R1I9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav2Q5R1I9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav2Q5R1I9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav2Q5R1I9 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.21■□□□□ 0.35
Trav2Q5R1I9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav2Q5R1I9 Gm10232-201ENSMUST00000089221 720 ntBASIC17.21■□□□□ 0.35
Trav2Q5R1I9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.2■□□□□ 0.34
Trav2Q5R1I9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav2Q5R1I9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav2Q5R1I9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms