Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.33■□□□□ 0.53
Trav6d-4Q5R1I0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6d-4Q5R1I0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trav6d-4Q5R1I0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-4Q5R1I0 Gm5812-201ENSMUST00000061073 957 ntBASIC18.33■□□□□ 0.52
Trav6d-4Q5R1I0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav6d-4Q5R1I0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-4Q5R1I0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-4Q5R1I0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav6d-4Q5R1I0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-4Q5R1I0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6d-4Q5R1I0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav6d-4Q5R1I0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav6d-4Q5R1I0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6d-4Q5R1I0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6d-4Q5R1I0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav6d-4Q5R1I0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.27■□□□□ 0.52
Trav6d-4Q5R1I0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6d-4Q5R1I0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6d-4Q5R1I0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6d-4Q5R1I0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6d-4Q5R1I0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Gm15546-201ENSMUST00000122095 826 ntBASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6d-4Q5R1I0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6d-4Q5R1I0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.21■□□□□ 0.51
Trav6d-4Q5R1I0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms