Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC39.67■■■■□ 3.94
Pds5bQ4VA53 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC39.66■■■■□ 3.94
Pds5bQ4VA53 Gm2011-201ENSMUST00000203124 1263 ntBASIC39.66■■■■□ 3.94
Pds5bQ4VA53 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Pds5bQ4VA53 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Pds5bQ4VA53 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC39.66■■■■□ 3.94
Pds5bQ4VA53 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Pds5bQ4VA53 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC39.64■■■■□ 3.94
Pds5bQ4VA53 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Pds5bQ4VA53 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Pds5bQ4VA53 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Pds5bQ4VA53 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Pds5bQ4VA53 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC39.6■■■■□ 3.93
Pds5bQ4VA53 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Pds5bQ4VA53 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC39.59■■■■□ 3.93
Pds5bQ4VA53 AC164629.5-201ENSMUST00000220387 632 ntBASIC39.59■■■■□ 3.93
Pds5bQ4VA53 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Pds5bQ4VA53 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
Pds5bQ4VA53 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Pds5bQ4VA53 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Pds5bQ4VA53 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC39.55■■■■□ 3.92
Pds5bQ4VA53 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC39.55■■■■□ 3.92
Pds5bQ4VA53 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC39.55■■■■□ 3.92
Pds5bQ4VA53 AC164433.2-201ENSMUST00000226346 1701 ntBASIC39.54■■■■□ 3.92
Pds5bQ4VA53 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC39.54■■■■□ 3.92
Pds5bQ4VA53 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
Pds5bQ4VA53 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC39.54■■■■□ 3.92
Pds5bQ4VA53 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
Pds5bQ4VA53 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Pds5bQ4VA53 Gm28731-201ENSMUST00000185564 1569 ntBASIC39.52■■■■□ 3.92
Pds5bQ4VA53 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
Pds5bQ4VA53 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
Pds5bQ4VA53 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Pds5bQ4VA53 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Pds5bQ4VA53 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
Pds5bQ4VA53 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
Pds5bQ4VA53 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
Pds5bQ4VA53 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC39.48■■■■□ 3.91
Pds5bQ4VA53 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
Pds5bQ4VA53 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC39.47■■■■□ 3.91
Pds5bQ4VA53 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC39.47■■■■□ 3.91
Pds5bQ4VA53 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Pds5bQ4VA53 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC39.46■■■■□ 3.91
Pds5bQ4VA53 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
Pds5bQ4VA53 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
Pds5bQ4VA53 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC39.45■■■■□ 3.91
Pds5bQ4VA53 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pds5bQ4VA53 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC39.44■■■■□ 3.9
Pds5bQ4VA53 Nsd1-206ENSMUST00000224918 1001 ntBASIC39.44■■■■□ 3.9
Pds5bQ4VA53 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Pds5bQ4VA53 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Pds5bQ4VA53 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC39.43■■■■□ 3.9
Pds5bQ4VA53 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Pds5bQ4VA53 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC39.42■■■■□ 3.9
Pds5bQ4VA53 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
Pds5bQ4VA53 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
Pds5bQ4VA53 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC39.41■■■■□ 3.9
Pds5bQ4VA53 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Pds5bQ4VA53 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC39.4■■■■□ 3.9
Pds5bQ4VA53 Spcs1-207ENSMUST00000228767 1008 ntBASIC39.4■■■■□ 3.9
Pds5bQ4VA53 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC39.39■■■■□ 3.9
Pds5bQ4VA53 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
Pds5bQ4VA53 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC39.38■■■■□ 3.89
Pds5bQ4VA53 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
Pds5bQ4VA53 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC39.38■■■■□ 3.89
Pds5bQ4VA53 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC39.37■■■■□ 3.89
Pds5bQ4VA53 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC39.37■■■■□ 3.89
Pds5bQ4VA53 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Pds5bQ4VA53 AC116713.1-201ENSMUST00000215074 430 ntBASIC39.36■■■■□ 3.89
Pds5bQ4VA53 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC39.36■■■■□ 3.89
Pds5bQ4VA53 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC39.35■■■■□ 3.89
Pds5bQ4VA53 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC39.35■■■■□ 3.89
Pds5bQ4VA53 Gm11847-201ENSMUST00000125165 1119 ntBASIC39.34■■■■□ 3.89
Pds5bQ4VA53 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
Pds5bQ4VA53 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC39.34■■■■□ 3.89
Pds5bQ4VA53 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC39.34■■■■□ 3.89
Pds5bQ4VA53 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Pds5bQ4VA53 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC39.34■■■■□ 3.89
Pds5bQ4VA53 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
Pds5bQ4VA53 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC39.33■■■■□ 3.89
Pds5bQ4VA53 Gm6139-201ENSMUST00000079261 882 ntBASIC39.33■■■■□ 3.89
Pds5bQ4VA53 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC39.33■■■■□ 3.89
Pds5bQ4VA53 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC39.32■■■■□ 3.89
Pds5bQ4VA53 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Pds5bQ4VA53 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Pds5bQ4VA53 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
Pds5bQ4VA53 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC39.32■■■■□ 3.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms