Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf223Q3UV31 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf223Q3UV31 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf223Q3UV31 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf223Q3UV31 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf223Q3UV31 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf223Q3UV31 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf223Q3UV31 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Rnf223Q3UV31 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Rnf223Q3UV31 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.29■■□□□ 1
Rnf223Q3UV31 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rnf223Q3UV31 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf223Q3UV31 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Gm15820-201ENSMUST00000201566 728 ntBASIC21.28■■□□□ 1
Rnf223Q3UV31 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf223Q3UV31 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rnf223Q3UV31 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf223Q3UV31 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rnf223Q3UV31 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf223Q3UV31 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rnf223Q3UV31 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.27■□□□□ 0.99
Rnf223Q3UV31 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf223Q3UV31 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.26■□□□□ 0.99
Rnf223Q3UV31 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf223Q3UV31 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf223Q3UV31 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.26■□□□□ 0.99
Rnf223Q3UV31 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf223Q3UV31 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf223Q3UV31 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.24■□□□□ 0.99
Rnf223Q3UV31 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf223Q3UV31 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf223Q3UV31 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rnf223Q3UV31 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf223Q3UV31 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf223Q3UV31 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rnf223Q3UV31 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf223Q3UV31 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf223Q3UV31 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf223Q3UV31 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf223Q3UV31 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rnf223Q3UV31 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.21■□□□□ 0.99
Rnf223Q3UV31 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf223Q3UV31 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.19■□□□□ 0.98
Rnf223Q3UV31 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf223Q3UV31 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf223Q3UV31 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf223Q3UV31 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf223Q3UV31 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.17■□□□□ 0.98
Rnf223Q3UV31 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf223Q3UV31 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf223Q3UV31 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf223Q3UV31 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf223Q3UV31 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Gm10232-201ENSMUST00000089221 720 ntBASIC21.15■□□□□ 0.98
Rnf223Q3UV31 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.15■□□□□ 0.98
Rnf223Q3UV31 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf223Q3UV31 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf223Q3UV31 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms