Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Nhej1Q3KNJ2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.19■■□□□ 1.3
Nhej1Q3KNJ2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nhej1Q3KNJ2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nhej1Q3KNJ2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nhej1Q3KNJ2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nhej1Q3KNJ2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.18■■□□□ 1.3
Nhej1Q3KNJ2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nhej1Q3KNJ2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nhej1Q3KNJ2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Nhej1Q3KNJ2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.17■■□□□ 1.3
Nhej1Q3KNJ2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Nhej1Q3KNJ2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nhej1Q3KNJ2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.15■■□□□ 1.3
Nhej1Q3KNJ2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nhej1Q3KNJ2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Nhej1Q3KNJ2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nhej1Q3KNJ2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Nhej1Q3KNJ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nhej1Q3KNJ2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nhej1Q3KNJ2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nhej1Q3KNJ2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nhej1Q3KNJ2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nhej1Q3KNJ2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.14■■□□□ 1.29
Nhej1Q3KNJ2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nhej1Q3KNJ2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nhej1Q3KNJ2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nhej1Q3KNJ2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.11■■□□□ 1.29
Nhej1Q3KNJ2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nhej1Q3KNJ2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Nhej1Q3KNJ2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
Nhej1Q3KNJ2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nhej1Q3KNJ2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.09■■□□□ 1.29
Nhej1Q3KNJ2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nhej1Q3KNJ2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nhej1Q3KNJ2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nhej1Q3KNJ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Nhej1Q3KNJ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nhej1Q3KNJ2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Nhej1Q3KNJ2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nhej1Q3KNJ2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nhej1Q3KNJ2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nhej1Q3KNJ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nhej1Q3KNJ2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms