Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Notch1Q01705 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Notch1Q01705 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Notch1Q01705 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Notch1Q01705 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.94■□□□□ 0.14
Notch1Q01705 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch1Q01705 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch1Q01705 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Notch1Q01705 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch1Q01705 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch1Q01705 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.93■□□□□ 0.14
Notch1Q01705 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.93■□□□□ 0.14
Notch1Q01705 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Notch1Q01705 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.92■□□□□ 0.14
Notch1Q01705 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Notch1Q01705 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Notch1Q01705 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Notch1Q01705 Gm29257-201ENSMUST00000186115 639 ntBASIC15.91■□□□□ 0.14
Notch1Q01705 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Notch1Q01705 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Notch1Q01705 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.91■□□□□ 0.14
Notch1Q01705 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Notch1Q01705 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Notch1Q01705 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.9■□□□□ 0.14
Notch1Q01705 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Notch1Q01705 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Notch1Q01705 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Notch1Q01705 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Notch1Q01705 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.89■□□□□ 0.13
Notch1Q01705 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.88■□□□□ 0.13
Notch1Q01705 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Notch1Q01705 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Notch1Q01705 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.88■□□□□ 0.13
Notch1Q01705 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.88■□□□□ 0.13
Notch1Q01705 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Notch1Q01705 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.87■□□□□ 0.13
Notch1Q01705 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Notch1Q01705 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Notch1Q01705 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Notch1Q01705 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.87■□□□□ 0.13
Notch1Q01705 Gm18284-201ENSMUST00000172604 624 ntBASIC15.87■□□□□ 0.13
Notch1Q01705 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.87■□□□□ 0.13
Notch1Q01705 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Notch1Q01705 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Notch1Q01705 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Notch1Q01705 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Notch1Q01705 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.86■□□□□ 0.13
Notch1Q01705 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Notch1Q01705 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Notch1Q01705 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.86■□□□□ 0.13
Notch1Q01705 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
Notch1Q01705 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Notch1Q01705 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Notch1Q01705 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Notch1Q01705 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.84■□□□□ 0.13
Notch1Q01705 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.84■□□□□ 0.13
Notch1Q01705 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.84■□□□□ 0.13
Notch1Q01705 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Notch1Q01705 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Notch1Q01705 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Notch1Q01705 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Notch1Q01705 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.83■□□□□ 0.12
Notch1Q01705 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Notch1Q01705 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Notch1Q01705 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Notch1Q01705 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms