Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smn1P97801 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smn1P97801 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.59■□□□□ 0.57
Smn1P97801 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smn1P97801 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smn1P97801 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.59■□□□□ 0.57
Smn1P97801 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.59■□□□□ 0.57
Smn1P97801 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Smn1P97801 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smn1P97801 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.58■□□□□ 0.57
Smn1P97801 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Smn1P97801 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smn1P97801 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smn1P97801 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smn1P97801 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smn1P97801 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smn1P97801 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.57■□□□□ 0.56
Smn1P97801 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Smn1P97801 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smn1P97801 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.57■□□□□ 0.56
Smn1P97801 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smn1P97801 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smn1P97801 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smn1P97801 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smn1P97801 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smn1P97801 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smn1P97801 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smn1P97801 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Smn1P97801 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
Smn1P97801 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smn1P97801 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smn1P97801 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smn1P97801 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.55■□□□□ 0.56
Smn1P97801 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smn1P97801 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smn1P97801 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.55■□□□□ 0.56
Smn1P97801 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smn1P97801 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smn1P97801 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smn1P97801 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.54■□□□□ 0.56
Smn1P97801 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smn1P97801 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smn1P97801 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smn1P97801 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Smn1P97801 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smn1P97801 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smn1P97801 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Smn1P97801 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smn1P97801 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smn1P97801 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smn1P97801 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smn1P97801 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smn1P97801 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.52■□□□□ 0.56
Smn1P97801 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smn1P97801 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smn1P97801 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Smn1P97801 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.52■□□□□ 0.55
Smn1P97801 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smn1P97801 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smn1P97801 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smn1P97801 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smn1P97801 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smn1P97801 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.51■□□□□ 0.55
Smn1P97801 Gm9812-201ENSMUST00000061934 968 ntBASIC18.51■□□□□ 0.55
Smn1P97801 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smn1P97801 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smn1P97801 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smn1P97801 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Smn1P97801 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.5■□□□□ 0.55
Smn1P97801 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smn1P97801 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smn1P97801 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smn1P97801 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smn1P97801 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.49■□□□□ 0.55
Smn1P97801 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.49■□□□□ 0.55
Smn1P97801 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.49■□□□□ 0.55
Smn1P97801 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smn1P97801 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smn1P97801 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smn1P97801 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.49■□□□□ 0.55
Smn1P97801 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smn1P97801 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smn1P97801 Gm22567-201ENSMUST00000175542 342 ntBASIC18.48■□□□□ 0.55
Smn1P97801 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smn1P97801 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smn1P97801 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.47■□□□□ 0.55
Smn1P97801 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.47■□□□□ 0.55
Smn1P97801 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Smn1P97801 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms