Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab4aP56371 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab4aP56371 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab4aP56371 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab4aP56371 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab4aP56371 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab4aP56371 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab4aP56371 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab4aP56371 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rab4aP56371 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab4aP56371 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab4aP56371 Gm26115-201ENSMUST00000175605 87 ntBASIC17.08■□□□□ 0.32
Rab4aP56371 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab4aP56371 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rab4aP56371 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab4aP56371 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.07■□□□□ 0.32
Rab4aP56371 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab4aP56371 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rab4aP56371 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rab4aP56371 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab4aP56371 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rab4aP56371 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.04■□□□□ 0.32
Rab4aP56371 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rab4aP56371 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab4aP56371 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rab4aP56371 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.04■□□□□ 0.32
Rab4aP56371 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rab4aP56371 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rab4aP56371 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab4aP56371 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.03■□□□□ 0.32
Rab4aP56371 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Rab4aP56371 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab4aP56371 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rab4aP56371 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Rab4aP56371 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab4aP56371 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab4aP56371 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab4aP56371 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rab4aP56371 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab4aP56371 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.02■□□□□ 0.32
Rab4aP56371 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rab4aP56371 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rab4aP56371 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab4aP56371 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rab4aP56371 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rab4aP56371 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rab4aP56371 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab4aP56371 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab4aP56371 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab4aP56371 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab4aP56371 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab4aP56371 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab4aP56371 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab4aP56371 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rab4aP56371 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab4aP56371 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rab4aP56371 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rab4aP56371 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.99■□□□□ 0.31
Rab4aP56371 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab4aP56371 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab4aP56371 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab4aP56371 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.99■□□□□ 0.31
Rab4aP56371 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.98■□□□□ 0.31
Rab4aP56371 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.98■□□□□ 0.31
Rab4aP56371 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rab4aP56371 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms