Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sox1P53783 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sox1P53783 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Sox1P53783 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.75■■□□□ 1.23
Sox1P53783 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox1P53783 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.75■■□□□ 1.23
Sox1P53783 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sox1P53783 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sox1P53783 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sox1P53783 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
Sox1P53783 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.73■■□□□ 1.23
Sox1P53783 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox1P53783 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox1P53783 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Sox1P53783 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox1P53783 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox1P53783 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox1P53783 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
Sox1P53783 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.72■■□□□ 1.23
Sox1P53783 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.72■■□□□ 1.23
Sox1P53783 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox1P53783 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.72■■□□□ 1.23
Sox1P53783 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Sox1P53783 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sox1P53783 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sox1P53783 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sox1P53783 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.69■■□□□ 1.22
Sox1P53783 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.69■■□□□ 1.22
Sox1P53783 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sox1P53783 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sox1P53783 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.68■■□□□ 1.22
Sox1P53783 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sox1P53783 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sox1P53783 Gm7291-201ENSMUST00000199147 382 ntBASIC22.68■■□□□ 1.22
Sox1P53783 Gm6139-201ENSMUST00000079261 882 ntBASIC22.68■■□□□ 1.22
Sox1P53783 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sox1P53783 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Sox1P53783 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sox1P53783 Gm5874-201ENSMUST00000096101 508 ntBASIC22.67■■□□□ 1.22
Sox1P53783 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sox1P53783 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sox1P53783 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.66■■□□□ 1.22
Sox1P53783 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sox1P53783 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sox1P53783 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sox1P53783 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.65■■□□□ 1.22
Sox1P53783 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
Sox1P53783 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.65■■□□□ 1.22
Sox1P53783 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox1P53783 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox1P53783 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox1P53783 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sox1P53783 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox1P53783 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.64■■□□□ 1.21
Sox1P53783 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.64■■□□□ 1.21
Sox1P53783 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
Sox1P53783 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox1P53783 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox1P53783 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
Sox1P53783 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox1P53783 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.63■■□□□ 1.21
Sox1P53783 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox1P53783 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Sox1P53783 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sox1P53783 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sox1P53783 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sox1P53783 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox1P53783 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.61■■□□□ 1.21
Sox1P53783 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox1P53783 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox1P53783 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Sox1P53783 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Sox1P53783 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.6■■□□□ 1.21
Sox1P53783 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.6■■□□□ 1.21
Sox1P53783 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Sox1P53783 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.6■■□□□ 1.21
Sox1P53783 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox1P53783 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms