Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mir3960-201ENSMUST00000198213 73 ntBASIC18.92■□□□□ 0.62
GdnfP48540 Gm45364-201ENSMUST00000210883 159 ntBASIC18.92■□□□□ 0.62
GdnfP48540 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
GdnfP48540 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GdnfP48540 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GdnfP48540 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GdnfP48540 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GdnfP48540 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
GdnfP48540 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GdnfP48540 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GdnfP48540 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
GdnfP48540 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GdnfP48540 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GdnfP48540 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GdnfP48540 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GdnfP48540 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.89■□□□□ 0.61
GdnfP48540 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.89■□□□□ 0.61
GdnfP48540 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GdnfP48540 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GdnfP48540 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GdnfP48540 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GdnfP48540 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GdnfP48540 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.88■□□□□ 0.61
GdnfP48540 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GdnfP48540 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GdnfP48540 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GdnfP48540 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.86■□□□□ 0.61
GdnfP48540 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.86■□□□□ 0.61
GdnfP48540 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GdnfP48540 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.85■□□□□ 0.61
GdnfP48540 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GdnfP48540 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GdnfP48540 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GdnfP48540 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GdnfP48540 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.85■□□□□ 0.61
GdnfP48540 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GdnfP48540 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GdnfP48540 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GdnfP48540 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.85■□□□□ 0.61
GdnfP48540 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GdnfP48540 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GdnfP48540 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GdnfP48540 Notumos-201ENSMUST00000151998 2659 ntBASIC18.84■□□□□ 0.61
GdnfP48540 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.84■□□□□ 0.61
GdnfP48540 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.84■□□□□ 0.61
GdnfP48540 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.84■□□□□ 0.61
GdnfP48540 Gm6311-201ENSMUST00000073790 878 ntBASIC18.84■□□□□ 0.61
GdnfP48540 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GdnfP48540 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GdnfP48540 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.84■□□□□ 0.61
GdnfP48540 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GdnfP48540 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GdnfP48540 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.83■□□□□ 0.6
GdnfP48540 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.83■□□□□ 0.6
GdnfP48540 Gm9812-201ENSMUST00000061934 968 ntBASIC18.83■□□□□ 0.6
GdnfP48540 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
GdnfP48540 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GdnfP48540 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GdnfP48540 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GdnfP48540 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GdnfP48540 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GdnfP48540 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GdnfP48540 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GdnfP48540 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.81■□□□□ 0.6
GdnfP48540 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.81■□□□□ 0.6
GdnfP48540 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GdnfP48540 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GdnfP48540 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GdnfP48540 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
GdnfP48540 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GdnfP48540 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GdnfP48540 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GdnfP48540 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GdnfP48540 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.79■□□□□ 0.6
GdnfP48540 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GdnfP48540 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GdnfP48540 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GdnfP48540 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.78■□□□□ 0.6
GdnfP48540 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms