Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Srp54P14576 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Srp54P14576 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Srp54P14576 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Srp54P14576 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Srp54P14576 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.33■■□□□ 1.01
Srp54P14576 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.33■■□□□ 1.01
Srp54P14576 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Srp54P14576 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Srp54P14576 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Srp54P14576 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.32■■□□□ 1
Srp54P14576 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Srp54P14576 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Srp54P14576 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.31■■□□□ 1
Srp54P14576 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srp54P14576 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Srp54P14576 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.3■■□□□ 1
Srp54P14576 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.3■■□□□ 1
Srp54P14576 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srp54P14576 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.29■■□□□ 1
Srp54P14576 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srp54P14576 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Srp54P14576 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srp54P14576 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.29■■□□□ 1
Srp54P14576 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.29■■□□□ 1
Srp54P14576 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.28■■□□□ 1
Srp54P14576 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srp54P14576 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srp54P14576 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Srp54P14576 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srp54P14576 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Srp54P14576 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srp54P14576 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.27■■□□□ 1
Srp54P14576 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Srp54P14576 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.27■■□□□ 1
Srp54P14576 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Srp54P14576 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.27■■□□□ 1
Srp54P14576 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Srp54P14576 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Srp54P14576 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Srp54P14576 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Srp54P14576 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Srp54P14576 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.26■□□□□ 0.99
Srp54P14576 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.26■□□□□ 0.99
Srp54P14576 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Srp54P14576 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Srp54P14576 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Srp54P14576 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.25■□□□□ 0.99
Srp54P14576 Gm22567-201ENSMUST00000175542 342 ntBASIC21.25■□□□□ 0.99
Srp54P14576 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srp54P14576 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srp54P14576 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srp54P14576 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srp54P14576 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Srp54P14576 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Srp54P14576 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.22■□□□□ 0.99
Srp54P14576 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.22■□□□□ 0.99
Srp54P14576 Rps24-207ENSMUST00000224568 714 ntBASIC21.22■□□□□ 0.99
Srp54P14576 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Srp54P14576 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srp54P14576 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Gm10232-201ENSMUST00000089221 720 ntBASIC21.21■□□□□ 0.99
Srp54P14576 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.21■□□□□ 0.99
Srp54P14576 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Srp54P14576 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms